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Bika 3 User manual

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  1. WIP. Work in progress
  2. Version 1.0.1
  3. Introduction and Overview
    1. Bika's web based workflow
    2. Icons
    3. Glossary. Definitions and Acronyms
    4. More than a LIMS. Web portal and information repository
    5. Preferred language. Translations
    6. Sort data dynamically
    7. Display columns. Screen preferences
    8. Search and Find
    9. Folder structure
  4. Installation and House keeping
    1. Installing Gaob Bika LIMS 3
    2. How to translate Bika LIMS
    3. User Support. How to get system issues attended to fast
    4. Manual writing style guideline
  5. Audit trail. Logs
    1. Log tabs. Audit trail
  6. Lab Users and roles. Groups
    1. Overview
    2. Creating and editing users
    3. Authorisation table. Bika LIMS
    4. User Preferences
    5. Should Lab Clerks create lab clients?
  7. Clients
    1. Introducing Clients
    2. Client Contacts. Client Users
    3. Client Preferences
  8. Setup and Configuration
    1. Setup Overview
      1. Navigating the LIMS setup
      2. De-activating setup items
      3. NB. Versioning
      4. Preservation & sample container automation
      5. Order of Configuration
      6. Loading set-up data spreadsheets
    2. System Defaults
      1. 'Bika Setup'
      2. Analysis Remarks fields
      3. IDs
      4. Lab information
      5. Accreditation information
      6. Optional Attributes
    3. ASs. Analysis Services
    4. Analysis Categories
    5. Analysis Profiles
    6. AR Templates
    7. Methods
    8. Calculations
    9. Analysis Specifications
    10. Reference Definitions
    11. Instruments
    12. Sample Types
    13. Sample Points
    14. Sample Containers, Container Types and Preservation
    15. Sample Partition Setup
    16. Worksheet Templates
    17. The lab
      1. Lab Information
      2. Lab Departments
      3. Lab Contacts
    18. Branding your LIMS
      1. Replacing the LIMS logo
      2. Editing the LIMS colour scheme
      3. Introduction to Theming
    19. AR Priorities
    20. Storage Locations
  9. Samples. Analyses. Analysis Requests
    1. Samples = Analysis Requests. Mostly
    2. Analysis Request and Sample Workflows summary
    3. Analysis Categories
    4. Creating Analysis Requests (ARs) By Column
      1. Creating a simple Analysis Request (AR) by Column
      2. Using Analysis Profiles and AR Templates on Column based form
      3. Advanced AR creation By Column
      4. Bulk AR Creation. Import from spreadsheet
    5. Create Analysis Requests (ARs) By Row
      1. Creating Analysis Requests (ARs) By Row
      2. Using Analysis Profiles and AR Templates on the Row based form
      3. Advanced AR Creation By Row
    6. Viewing an Analysis Request
    7. Editing an Analysis Request
    8. Receiving Samples · Label printing
    9. Single AR analysis results capture
    10. Results Verification. Or Retraction
    11. Results Publication
  10. Micro-Biological analyses
    1. Bacterial Identification
    2. Sensitivity and Susceptibility Testing
  11. Batching
    1. Analysis Batches. Overview
    2. Creating a Batch
  12. QC. Reference Samples
    1. Overview
    2. Creating a Reference Sample
  13. Worksheets. QC
    1. Worksheet Overview
    2. Creating Worksheets
    3. Worksheet QC
    4. Exporting a Worksheet to an Instrument
  14. Instrument Import
    1. Exporting a Sample list to an instrument
    2. Importing results
  15. Instrument Management and QC
    1. Method, Instrument and Calculation integrity
    2. Corrective Action
    3. Calibration certificates
    4. In-house Instrument QC
    5. Flow charts - method, instrument and calculation combinations
      1. Capturing method, instrument and calculation for a result
  16. Introduction to Bika Health
    1. Bika Health configuration
    2. Creating a Case
    3. Patients
      1. Create, View and Edit Patients
      2. Patient Results History
      3. Patient Cases, Samples and Analysis Requests
    4. Micro-Biological analyses
    5. Anonymous Patients. Quicker Case and AR creation

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